Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 NACAP7-201ENST00000407371 609 ntBASIC5.68□□□□□ -1.5
SMOQ99835 HMGB1P49-201ENST00000418882 569 ntBASIC5.68□□□□□ -1.5
SMOQ99835 SLC35E1P1-201ENST00000419313 864 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.68□□□□□ -1.5
SMOQ99835 RPS4XP16-201ENST00000427198 791 ntBASIC5.68□□□□□ -1.5
SMOQ99835 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.68□□□□□ -1.5
SMOQ99835 OR52B5P-201ENST00000435337 951 ntBASIC5.68□□□□□ -1.5
SMOQ99835 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.68□□□□□ -1.5
SMOQ99835 GAPDHP25-201ENST00000447061 1001 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.68□□□□□ -1.5
SMOQ99835 RPS6P2-201ENST00000454208 705 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AC110749.1-201ENST00000462007 357 ntBASIC5.68□□□□□ -1.5
SMOQ99835 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.68□□□□□ -1.5
SMOQ99835 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SMOQ99835 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.68□□□□□ -1.5
SMOQ99835 AC011037.1-201ENST00000483964 558 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AC058823.1-201ENST00000485315 474 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AC012123.2-201ENST00000485809 248 ntBASIC5.68□□□□□ -1.5
SMOQ99835 RPS21P4-201ENST00000487122 248 ntBASIC5.68□□□□□ -1.5
SMOQ99835 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.68□□□□□ -1.5
SMOQ99835 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.68□□□□□ -1.5
SMOQ99835 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.68□□□□□ -1.5
SMOQ99835 AC010486.3-201ENST00000511602 785 ntBASIC5.68□□□□□ -1.5
SMOQ99835 Y_RNA.688-201ENST00000516565 95 ntBASIC5.68□□□□□ -1.5
SMOQ99835 RNA5SP34-201ENST00000516887 130 ntBASIC5.68□□□□□ -1.5
SMOQ99835 OR8Q1P-201ENST00000526467 655 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AC023050.2-201ENST00000544968 387 ntBASIC5.68□□□□□ -1.5
SMOQ99835 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.68□□□□□ -1.5
SMOQ99835 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.68□□□□□ -1.5
SMOQ99835 AL049779.2-201ENST00000553847 315 ntBASIC5.68□□□□□ -1.5
SMOQ99835 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.68□□□□□ -1.5
SMOQ99835 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.68□□□□□ -1.5
SMOQ99835 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.68□□□□□ -1.5
SMOQ99835 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.68□□□□□ -1.5
SMOQ99835 AC005341.1-201ENST00000571086 708 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.68□□□□□ -1.5
SMOQ99835 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SMOQ99835 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.68□□□□□ -1.5
SMOQ99835 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.68□□□□□ -1.5
SMOQ99835 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.68□□□□□ -1.5
SMOQ99835 MTND3P19-201ENST00000603825 345 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AL022161.1-201ENST00000604390 213 ntBASIC5.68□□□□□ -1.5
SMOQ99835 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.68□□□□□ -1.5
SMOQ99835 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
SMOQ99835 AP002782.1-201ENST00000623107 614 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AL121594.5-201ENST00000631724 573 ntBASIC5.68□□□□□ -1.5
SMOQ99835 OR52B5P-202ENST00000641118 1110 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AC100757.1-201ENST00000616872 1835 ntBASIC5.68□□□□□ -1.5
SMOQ99835 AL078621.3-201ENST00000623707 2042 ntBASIC5.68□□□□□ -1.5
SMOQ99835 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.68□□□□□ -1.5
SMOQ99835 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
SMOQ99835 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.68□□□□□ -1.5
SMOQ99835 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SMOQ99835 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.68□□□□□ -1.5
SMOQ99835 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.68□□□□□ -1.5
SMOQ99835 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.68□□□□□ -1.5
SMOQ99835 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.67□□□□□ -1.5
SMOQ99835 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SMOQ99835 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
SMOQ99835 OR55B1P-203ENST00000641518 2602 ntBASIC5.67□□□□□ -1.5
SMOQ99835 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.67□□□□□ -1.5
SMOQ99835 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMOQ99835 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMOQ99835 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.67□□□□□ -1.5
SMOQ99835 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.67□□□□□ -1.5
SMOQ99835 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMOQ99835 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.67□□□□□ -1.5
SMOQ99835 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.67□□□□□ -1.5
SMOQ99835 Y_RNA.578-201ENST00000390903 88 ntBASIC5.67□□□□□ -1.5
SMOQ99835 AL136310.1-201ENST00000404926 654 ntBASIC5.67□□□□□ -1.5
SMOQ99835 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
SMOQ99835 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.67□□□□□ -1.5
SMOQ99835 FAM96AP1-201ENST00000430879 482 ntBASIC5.67□□□□□ -1.5
SMOQ99835 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMOQ99835 AC099670.2-201ENST00000435130 321 ntBASIC5.67□□□□□ -1.5
SMOQ99835 AC093716.1-201ENST00000435923 377 ntBASIC5.67□□□□□ -1.5
SMOQ99835 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.67□□□□□ -1.5
SMOQ99835 AC244505.3-201ENST00000454598 187 ntBASIC5.67□□□□□ -1.5
SMOQ99835 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SMOQ99835 PSAT1P4-201ENST00000466500 526 ntBASIC5.67□□□□□ -1.5
SMOQ99835 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMOQ99835 RPL7P39-201ENST00000481157 744 ntBASIC5.67□□□□□ -1.5
SMOQ99835 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMOQ99835 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.67□□□□□ -1.5
SMOQ99835 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.67□□□□□ -1.5
SMOQ99835 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.67□□□□□ -1.5
SMOQ99835 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMOQ99835 YWHABP2-201ENST00000540201 713 ntBASIC5.67□□□□□ -1.5
SMOQ99835 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.67□□□□□ -1.5
SMOQ99835 AC116158.1-201ENST00000560231 2129 ntBASIC5.67□□□□□ -1.5
SMOQ99835 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.67□□□□□ -1.5
SMOQ99835 RN7SL356P-201ENST00000582228 248 ntBASIC5.67□□□□□ -1.5
SMOQ99835 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.67□□□□□ -1.5
SMOQ99835 AC069304.3-201ENST00000603938 1084 ntBASIC5.67□□□□□ -1.5
SMOQ99835 AC005252.1-201ENST00000604518 1063 ntBASIC5.67□□□□□ -1.5
SMOQ99835 AL139407.1-201ENST00000613826 1175 ntBASIC5.67□□□□□ -1.5
SMOQ99835 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.67□□□□□ -1.5
SMOQ99835 AL121890.3-201ENST00000618494 516 ntBASIC5.67□□□□□ -1.5
SMOQ99835 AL512506.2-201ENST00000624472 458 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms