Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.37□□□□□ -1.55
RAD9AQ99638 SNORA2.3-201ENST00000383920 135 ntBASIC5.37□□□□□ -1.55
RAD9AQ99638 SNORA77-201ENST00000408716 125 ntBASIC5.37□□□□□ -1.55
RAD9AQ99638 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.37□□□□□ -1.55
RAD9AQ99638 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.37□□□□□ -1.55
RAD9AQ99638 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.37□□□□□ -1.55
RAD9AQ99638 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.37□□□□□ -1.55
RAD9AQ99638 RN7SKP122-201ENST00000515923 296 ntBASIC5.37□□□□□ -1.55
RAD9AQ99638 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.37□□□□□ -1.55
RAD9AQ99638 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.37□□□□□ -1.55
RAD9AQ99638 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.37□□□□□ -1.55
RAD9AQ99638 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.37□□□□□ -1.55
RAD9AQ99638 AC098935.2-201ENST00000604222 466 ntBASIC5.37□□□□□ -1.55
RAD9AQ99638 BNIP3P35-201ENST00000604530 490 ntBASIC5.37□□□□□ -1.55
RAD9AQ99638 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.37□□□□□ -1.55
RAD9AQ99638 MIR6133-201ENST00000617057 108 ntBASIC5.37□□□□□ -1.55
RAD9AQ99638 AC009032.1-201ENST00000617574 431 ntBASIC5.37□□□□□ -1.55
RAD9AQ99638 AC006213.5-201ENST00000619673 288 ntBASIC5.37□□□□□ -1.55
RAD9AQ99638 MIR6830-201ENST00000636015 70 ntBASIC5.37□□□□□ -1.55
RAD9AQ99638 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAD9AQ99638 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAD9AQ99638 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAD9AQ99638 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAD9AQ99638 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAD9AQ99638 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RAD9AQ99638 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAD9AQ99638 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RAD9AQ99638 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
RAD9AQ99638 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RAD9AQ99638 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RAD9AQ99638 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RAD9AQ99638 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RAD9AQ99638 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAD9AQ99638 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RAD9AQ99638 SNORA70F-201ENST00000384142 135 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 RNA5SP187-201ENST00000384400 119 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 RNU6-1263P-201ENST00000384601 106 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 RN7SKP106-201ENST00000410832 272 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 SEPT7P8-201ENST00000413308 775 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 RPL17P36-201ENST00000420302 549 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.36□□□□□ -1.55
RAD9AQ99638 RAB28P3-201ENST00000448325 597 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 AC107015.1-201ENST00000466902 747 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RAD9AQ99638 AC022336.1-201ENST00000475510 337 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.36□□□□□ -1.55
RAD9AQ99638 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.36□□□□□ -1.55
RAD9AQ99638 SEC11B-201ENST00000518383 499 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.36□□□□□ -1.55
RAD9AQ99638 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.36□□□□□ -1.55
RAD9AQ99638 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.36□□□□□ -1.55
RAD9AQ99638 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RAD9AQ99638 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.36□□□□□ -1.55
RAD9AQ99638 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.36□□□□□ -1.55
RAD9AQ99638 AL121839.1-201ENST00000556233 1185 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 BNIP3P5-201ENST00000562290 498 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 AC092653.1-201ENST00000608509 531 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RAD9AQ99638 CR381572.2-201ENST00000624852 397 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.36□□□□□ -1.55
RAD9AQ99638 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RAD9AQ99638 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.36□□□□□ -1.55
RAD9AQ99638 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RAD9AQ99638 AC010928.1-201ENST00000592477 1447 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.36□□□□□ -1.55
RAD9AQ99638 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAD9AQ99638 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAD9AQ99638 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.36□□□□□ -1.55
RAD9AQ99638 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAD9AQ99638 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.36□□□□□ -1.55
RAD9AQ99638 AC139713.2-214ENST00000642059 1811 ntBASIC5.36□□□□□ -1.55
RAD9AQ99638 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RAD9AQ99638 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.36□□□□□ -1.55
RAD9AQ99638 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RAD9AQ99638 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RAD9AQ99638 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RAD9AQ99638 AL022311.1-201ENST00000623726 19416 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 AC019072.1-201ENST00000604535 1551 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.35□□□□□ -1.55
RAD9AQ99638 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RAD9AQ99638 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 U3.22-201ENST00000391120 215 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 ATP5HP3-201ENST00000396994 486 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 GPS2P1-201ENST00000411761 986 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 CHIAP3-201ENST00000423668 1133 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 GTF2IP2-201ENST00000424290 697 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 AL445528.1-201ENST00000426330 420 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 HMGN2P27-201ENST00000427352 270 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 AL590623.1-201ENST00000427864 105 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.35□□□□□ -1.55
RAD9AQ99638 AC009238.2-201ENST00000431026 355 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RAD9AQ99638 AC090018.1-201ENST00000434369 367 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 AC073143.1-201ENST00000436316 395 ntBASIC5.35□□□□□ -1.55
RAD9AQ99638 EIF2S2P2-201ENST00000447161 982 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms