Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AC074087.1-201ENST00000512059 724 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 MTATP6P1-201ENST00000514057 681 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 SNORA19.3-201ENST00000516165 130 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 IGLVIV-64-201ENST00000518581 301 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.39□□□□□ -1.71
CX3CL1P78423 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AC068993.1-201ENST00000546724 589 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 POLR2KP1-201ENST00000553226 168 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AL121594.4-201ENST00000556211 1196 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CL1P78423 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.39□□□□□ -1.71
CX3CL1P78423 SULT1C2P2-201ENST00000562517 294 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 VN1R87P-201ENST00000596706 487 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AC125494.3-201ENST00000602759 455 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AL139124.1-201ENST00000609123 421 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 RN7SL787P-201ENST00000613000 284 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AC024595.1-201ENST00000623088 387 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AC015726.3-201ENST00000624501 418 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 LINC01808-202ENST00000641680 1116 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 RNF6P1-201ENST00000444889 1784 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CX3CL1P78423 AC073136.1-201ENST00000449426 2884 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.39□□□□□ -1.71
CX3CL1P78423 AL137100.1-201ENST00000556703 1620 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 AC093775.1-201ENST00000624154 1868 ntBASIC4.39□□□□□ -1.71
CX3CL1P78423 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CX3CL1P78423 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.38□□□□□ -1.71
CX3CL1P78423 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC083899.1-201ENST00000454465 3819 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 LINC01963-201ENST00000562038 3148 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 U3.28-201ENST00000391249 210 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 DNAJC19P6-201ENST00000401853 280 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 RNU6-584P-201ENST00000410350 95 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 RN7SKP286-201ENST00000410894 299 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AC092638.1-201ENST00000411966 1275 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AC106883.1-201ENST00000418805 562 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 MTCO2P23-201ENST00000425216 680 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.38□□□□□ -1.71
CX3CL1P78423 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC068135.1-201ENST00000446164 246 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 OR51B8P-201ENST00000449892 769 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AL358876.1-201ENST00000453364 1075 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 TPT1P1-201ENST00000458495 518 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 RPL23AP12-201ENST00000467573 473 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AC117394.1-201ENST00000477323 567 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 RPL21P6-201ENST00000479171 504 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 METTL15P1-201ENST00000481421 1045 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AL049874.2-201ENST00000492636 288 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.38□□□□□ -1.71
CX3CL1P78423 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.38□□□□□ -1.71
CX3CL1P78423 RNU6-513P-201ENST00000516104 104 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 RNU6-276P-201ENST00000516114 96 ntBASIC4.38□□□□□ -1.71
CX3CL1P78423 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms