Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.52□□□□□ -1.69
SHC1P29353 RPS29P9-201ENST00000440360 171 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.52□□□□□ -1.69
SHC1P29353 AL031584.1-201ENST00000447169 754 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AL354714.3-201ENST00000447284 493 ntBASIC4.52□□□□□ -1.69
SHC1P29353 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AL691482.1-201ENST00000453255 87 ntBASIC4.52□□□□□ -1.69
SHC1P29353 HMGB1P4-201ENST00000455362 567 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AC015908.1-201ENST00000478739 476 ntBASIC4.52□□□□□ -1.69
SHC1P29353 RPL32P9-201ENST00000487963 407 ntBASIC4.52□□□□□ -1.69
SHC1P29353 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.52□□□□□ -1.69
SHC1P29353 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.52□□□□□ -1.69
SHC1P29353 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.52□□□□□ -1.69
SHC1P29353 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.52□□□□□ -1.69
SHC1P29353 MRPS33P2-201ENST00000507850 322 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.52□□□□□ -1.69
SHC1P29353 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 RPL23AP53-201ENST00000521854 457 ntBASIC4.52□□□□□ -1.69
SHC1P29353 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.52□□□□□ -1.69
SHC1P29353 AC125612.1-201ENST00000547580 377 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.52□□□□□ -1.69
SHC1P29353 AGGF1P9-201ENST00000561884 913 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AC126365.2-201ENST00000580630 379 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AC007448.1-201ENST00000582714 234 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.52□□□□□ -1.69
SHC1P29353 AL139022.2-201ENST00000606934 443 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AC133644.2-201ENST00000608142 540 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AC117490.2-201ENST00000610042 594 ntBASIC4.52□□□□□ -1.69
SHC1P29353 MIR8069-1-201ENST00000616627 86 ntBASIC4.52□□□□□ -1.69
SHC1P29353 MIR8069-2-201ENST00000621412 86 ntBASIC4.52□□□□□ -1.69
SHC1P29353 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SHC1P29353 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SHC1P29353 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 SALL4P2-201ENST00000423288 2910 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.52□□□□□ -1.69
SHC1P29353 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.51□□□□□ -1.69
SHC1P29353 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.51□□□□□ -1.69
SHC1P29353 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.51□□□□□ -1.69
SHC1P29353 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.51□□□□□ -1.69
SHC1P29353 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SHC1P29353 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SHC1P29353 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.51□□□□□ -1.69
SHC1P29353 RNU6-819P-201ENST00000364116 107 ntBASIC4.51□□□□□ -1.69
SHC1P29353 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 ATP5HP3-201ENST00000396994 486 ntBASIC4.51□□□□□ -1.69
SHC1P29353 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 AF186996.5-201ENST00000418098 904 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AC007064.3-201ENST00000422608 359 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.51□□□□□ -1.69
SHC1P29353 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.51□□□□□ -1.69
SHC1P29353 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.51□□□□□ -1.69
SHC1P29353 MTCO1P57-201ENST00000432182 261 ntBASIC4.51□□□□□ -1.69
SHC1P29353 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.51□□□□□ -1.69
SHC1P29353 AL450023.3-201ENST00000440592 271 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AL691517.1-201ENST00000440833 1235 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.51□□□□□ -1.69
SHC1P29353 AC093166.2-201ENST00000455969 1017 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.51□□□□□ -1.69
SHC1P29353 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.51□□□□□ -1.69
SHC1P29353 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.51□□□□□ -1.69
SHC1P29353 RPL5P22-201ENST00000480199 884 ntBASIC4.51□□□□□ -1.69
SHC1P29353 NPM1P29-201ENST00000483112 803 ntBASIC4.51□□□□□ -1.69
SHC1P29353 RN7SL346P-201ENST00000491561 294 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AC008628.1-201ENST00000508663 265 ntBASIC4.51□□□□□ -1.69
SHC1P29353 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.51□□□□□ -1.69
SHC1P29353 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.51□□□□□ -1.69
SHC1P29353 MTND1P6-201ENST00000523621 946 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AP003049.1-201ENST00000529418 457 ntBASIC4.51□□□□□ -1.69
SHC1P29353 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.51□□□□□ -1.69
SHC1P29353 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.51□□□□□ -1.69
SHC1P29353 AL512310.9-201ENST00000553311 948 ntBASIC4.51□□□□□ -1.69
SHC1P29353 NDUFB4P11-201ENST00000560510 395 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.51□□□□□ -1.69
SHC1P29353 AC020915.5-201ENST00000596836 964 ntBASIC4.51□□□□□ -1.69
SHC1P29353 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.51□□□□□ -1.69
SHC1P29353 AP003117.1-201ENST00000602771 554 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AC110792.4-201ENST00000609843 298 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AC009032.1-201ENST00000617574 431 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AL162233.1-201ENST00000620014 944 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AC068870.2-201ENST00000620635 389 ntBASIC4.51□□□□□ -1.69
SHC1P29353 AC006249.1-201ENST00000621223 471 ntBASIC4.51□□□□□ -1.69
SHC1P29353 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SHC1P29353 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 AL512283.1-201ENST00000606756 1384 ntBASIC4.51□□□□□ -1.69
SHC1P29353 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHC1P29353 AC068446.1-201ENST00000556425 1549 ntBASIC4.51□□□□□ -1.69
SHC1P29353 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms