Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC093799.2-201ENST00000610062 578 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 RPL23AP61-201ENST00000623642 466 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 AC021106.3-201ENST00000623925 531 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.26□□□□□ -1.57
PDGFRAP16234 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFRAP16234 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PDGFRAP16234 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFRAP16234 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.26□□□□□ -1.57
PDGFRAP16234 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PDGFRAP16234 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PDGFRAP16234 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
PDGFRAP16234 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFRAP16234 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.26□□□□□ -1.57
PDGFRAP16234 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFRAP16234 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFRAP16234 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
PDGFRAP16234 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFRAP16234 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFRAP16234 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDGFRAP16234 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
PDGFRAP16234 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFRAP16234 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFRAP16234 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFRAP16234 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFRAP16234 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDGFRAP16234 AC013442.1-201ENST00000397347 228 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 LRRC37BP1-201ENST00000398851 714 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 AL136131.1-201ENST00000406079 803 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 RPA2P2-201ENST00000419698 796 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFRAP16234 AC104333.2-201ENST00000422630 192 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFRAP16234 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDGFRAP16234 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFRAP16234 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFRAP16234 AC245517.2-201ENST00000442890 346 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFRAP16234 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFRAP16234 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.25□□□□□ -1.57
PDGFRAP16234 AL691482.1-201ENST00000453255 87 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 AC093166.2-201ENST00000455969 1017 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 snoU13.20-201ENST00000459180 104 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 RPS4XP12-201ENST00000461747 709 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 RPL5P13-201ENST00000462840 709 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFRAP16234 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.25□□□□□ -1.57
PDGFRAP16234 SNRPGP1-201ENST00000553864 222 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 SULT1C2P2-201ENST00000562517 294 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFRAP16234 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.25□□□□□ -1.57
PDGFRAP16234 AC068020.1-201ENST00000594215 661 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 AC130352.1-201ENST00000602979 661 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 AC023813.4-201ENST00000607580 580 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 AC135803.1-201ENST00000608748 565 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFRAP16234 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.25□□□□□ -1.57
PDGFRAP16234 SMG1P4-204ENST00000523028 4131 ntBASIC5.25□□□□□ -1.57
PDGFRAP16234 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFRAP16234 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.25□□□□□ -1.57
PDGFRAP16234 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFRAP16234 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFRAP16234 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFRAP16234 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFRAP16234 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
PDGFRAP16234 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFRAP16234 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PDGFRAP16234 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.24□□□□□ -1.57
PDGFRAP16234 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PDGFRAP16234 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDGFRAP16234 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDGFRAP16234 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PDGFRAP16234 GJA6P-201ENST00000415117 1042 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFRAP16234 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFRAP16234 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFRAP16234 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 RPL35AP21-201ENST00000437667 333 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 OR7E125P-201ENST00000443450 846 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFRAP16234 OTX2P1-201ENST00000450956 354 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 RPL7P61-201ENST00000451721 751 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.24□□□□□ -1.57
PDGFRAP16234 AL133244.1-201ENST00000456007 258 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 RN7SL97P-201ENST00000486780 299 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 AC073073.1-201ENST00000493920 463 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFRAP16234 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFRAP16234 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.24□□□□□ -1.57
PDGFRAP16234 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFRAP16234 OR8X1P-201ENST00000534542 869 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFRAP16234 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFRAP16234 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFRAP16234 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.24□□□□□ -1.57
PDGFRAP16234 AC116553.2-201ENST00000564203 463 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.24□□□□□ -1.57
PDGFRAP16234 AC011840.5-201ENST00000582125 771 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 AP005262.1-201ENST00000582646 997 ntBASIC5.24□□□□□ -1.57
PDGFRAP16234 AL021368.1-201ENST00000607490 540 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms