Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AP001350.1-201ENST00000601906 1524 ntBASIC6.49□□□□□ -1.37
NID1P14543 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.49□□□□□ -1.37
NID1P14543 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NID1P14543 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.49□□□□□ -1.37
NID1P14543 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
NID1P14543 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
NID1P14543 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
NID1P14543 CKAP2P1-201ENST00000555477 2049 ntBASIC6.49□□□□□ -1.37
NID1P14543 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.48□□□□□ -1.37
NID1P14543 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
NID1P14543 HSPD1P1-201ENST00000503199 1726 ntBASIC6.48□□□□□ -1.37
NID1P14543 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 AC011155.1-201ENST00000316512 456 ntBASIC6.48□□□□□ -1.37
NID1P14543 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.48□□□□□ -1.37
NID1P14543 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 MIR369-201ENST00000362155 70 ntBASIC6.48□□□□□ -1.37
NID1P14543 RNU6-1309P-201ENST00000363305 108 ntBASIC6.48□□□□□ -1.37
NID1P14543 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 RNU6-639P-201ENST00000384074 107 ntBASIC6.48□□□□□ -1.37
NID1P14543 SNORA11D-201ENST00000408548 128 ntBASIC6.48□□□□□ -1.37
NID1P14543 SNORA11E-201ENST00000408778 128 ntBASIC6.48□□□□□ -1.37
NID1P14543 Y_RNA.608-201ENST00000410647 95 ntBASIC6.48□□□□□ -1.37
NID1P14543 RN7SKP137-201ENST00000411074 307 ntBASIC6.48□□□□□ -1.37
NID1P14543 RPL35AP24-201ENST00000413846 330 ntBASIC6.48□□□□□ -1.37
NID1P14543 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.48□□□□□ -1.37
NID1P14543 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.48□□□□□ -1.37
NID1P14543 DYNLL1P7-201ENST00000429273 258 ntBASIC6.48□□□□□ -1.37
NID1P14543 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.48□□□□□ -1.37
NID1P14543 RPL14P5-201ENST00000436474 730 ntBASIC6.48□□□□□ -1.37
NID1P14543 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC6.48□□□□□ -1.37
NID1P14543 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.48□□□□□ -1.37
NID1P14543 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.48□□□□□ -1.37
NID1P14543 OR52I1-201ENST00000450052 1050 ntBASIC6.48□□□□□ -1.37
NID1P14543 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.48□□□□□ -1.37
NID1P14543 MTND1P12-201ENST00000455231 147 ntBASIC6.48□□□□□ -1.37
NID1P14543 AL583843.1-201ENST00000456070 346 ntBASIC6.48□□□□□ -1.37
NID1P14543 AC099563.1-201ENST00000456086 418 ntBASIC6.48□□□□□ -1.37
NID1P14543 YRDCP3-201ENST00000456507 480 ntBASIC6.48□□□□□ -1.37
NID1P14543 HSPE1P22-201ENST00000456856 327 ntBASIC6.48□□□□□ -1.37
NID1P14543 WBP1LP1-201ENST00000460451 896 ntBASIC6.48□□□□□ -1.37
NID1P14543 CBX5P1-201ENST00000468470 561 ntBASIC6.48□□□□□ -1.37
NID1P14543 AC022730.1-201ENST00000473114 568 ntBASIC6.48□□□□□ -1.37
NID1P14543 AL163540.1-201ENST00000485382 386 ntBASIC6.48□□□□□ -1.37
NID1P14543 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.48□□□□□ -1.37
NID1P14543 EEF1B2P2-201ENST00000519625 676 ntBASIC6.48□□□□□ -1.37
NID1P14543 AC008429.4-201ENST00000521201 182 ntBASIC6.48□□□□□ -1.37
NID1P14543 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.48□□□□□ -1.37
NID1P14543 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 AC027026.1-201ENST00000532323 742 ntBASIC6.48□□□□□ -1.37
NID1P14543 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.48□□□□□ -1.37
NID1P14543 AC018630.1-201ENST00000541376 925 ntBASIC6.48□□□□□ -1.37
NID1P14543 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.48□□□□□ -1.37
NID1P14543 FAM30C-201ENST00000561158 410 ntBASIC6.48□□□□□ -1.37
NID1P14543 AC018558.5-201ENST00000565840 952 ntBASIC6.48□□□□□ -1.37
NID1P14543 AC141257.3-201ENST00000572906 215 ntBASIC6.48□□□□□ -1.37
NID1P14543 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC6.48□□□□□ -1.37
NID1P14543 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.48□□□□□ -1.37
NID1P14543 AC004908.2-201ENST00000609090 574 ntBASIC6.48□□□□□ -1.37
NID1P14543 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.48□□□□□ -1.37
NID1P14543 AC009248.2-201ENST00000619826 254 ntBASIC6.48□□□□□ -1.37
NID1P14543 MIR6813-201ENST00000621638 56 ntBASIC6.48□□□□□ -1.37
NID1P14543 AC093909.6-201ENST00000624757 775 ntBASIC6.48□□□□□ -1.37
NID1P14543 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.48□□□□□ -1.37
NID1P14543 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.48□□□□□ -1.37
NID1P14543 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.48□□□□□ -1.37
NID1P14543 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.48□□□□□ -1.37
NID1P14543 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
NID1P14543 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.48□□□□□ -1.37
NID1P14543 AC107980.1-201ENST00000558671 3355 ntBASIC6.48□□□□□ -1.37
NID1P14543 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NID1P14543 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NID1P14543 AC024560.2-201ENST00000507981 1497 ntBASIC6.47□□□□□ -1.37
NID1P14543 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.47□□□□□ -1.37
NID1P14543 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.47□□□□□ -1.37
NID1P14543 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.47□□□□□ -1.37
NID1P14543 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NID1P14543 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
NID1P14543 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NID1P14543 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NID1P14543 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NID1P14543 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.47□□□□□ -1.37
NID1P14543 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
NID1P14543 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NID1P14543 MIR640-201ENST00000385086 96 ntBASIC6.47□□□□□ -1.37
NID1P14543 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
NID1P14543 FAUP2-201ENST00000394301 401 ntBASIC6.47□□□□□ -1.37
NID1P14543 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
NID1P14543 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.47□□□□□ -1.37
NID1P14543 SNORA11.5-201ENST00000408163 128 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms