Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC006963.1-201ENST00000624003 1052 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC009039.2-201ENST00000624524 529 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC083865.1-201ENST00000636634 831 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC008432.1-201ENST00000615912 1320 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC002525.1-201ENST00000624392 1622 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 U8.4-201ENST00000363626 134 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 RPL10P10-201ENST00000403509 664 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 MTATP6P20-201ENST00000414147 562 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 HIGD1AP15-201ENST00000416198 280 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 XKRYP1-201ENST00000423438 492 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 PRUNEP1-201ENST00000425846 705 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 MTCO1P43-201ENST00000431831 488 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 XKRYP2-201ENST00000432915 492 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 FABP5P3-201ENST00000437960 408 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 NANOGP9-201ENST00000439890 892 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 MED28P3-201ENST00000444288 531 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 EIF2S2P2-201ENST00000447161 982 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AC096992.1-201ENST00000459808 709 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 RN7SL197P-201ENST00000466981 299 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 CBX1P5-201ENST00000475330 559 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 RPL5P22-201ENST00000480199 884 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 SYT14P1-201ENST00000481459 721 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 RNA5SP230-201ENST00000517039 122 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AP001636.2-201ENST00000525517 696 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AC023538.1-201ENST00000534576 736 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AL132657.2-201ENST00000564417 358 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 MIR4700-201ENST00000578311 74 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 RN7SL708P-201ENST00000580952 299 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 MIR4660-201ENST00000583549 74 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AL022067.1-201ENST00000602426 454 ntBASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SSX2IPQ9Y2D8 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC010132.2-201ENST00000295493 1043 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 RNA5SP305-201ENST00000362665 119 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AL645733.1-201ENST00000402250 217 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AL356968.2-201ENST00000412769 1257 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC079809.1-201ENST00000415468 276 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC007161.1-204ENST00000423039 460 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 RPL12P17-201ENST00000432393 498 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 VN1R54P-201ENST00000435210 1049 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 Z77249.1-201ENST00000444622 1175 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AC023271.1-201ENST00000445936 1090 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 MTND6P5-201ENST00000448266 512 ntBASIC5.85□□□□□ -1.47
SSX2IPQ9Y2D8 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms