Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 PPIAP19-201ENST00000486414 492 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC021146.5-201ENST00000503544 545 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC091860.1-201ENST00000505723 432 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC074087.1-201ENST00000512059 724 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 Y_RNA.717-201ENST00000517106 92 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 CYCSP22-201ENST00000517555 339 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 OR7E128P-201ENST00000532736 1024 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AP001542.2-201ENST00000593141 364 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AL513327.3-201ENST00000602618 469 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC006386.1-201ENST00000619436 415 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AC127024.6-201ENST00000621598 424 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 AL138820.1-201ENST00000617901 5305 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 SEPT7P7-201ENST00000420492 1301 ntBASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.39□□□□□ -1.55
NECTIN3Q9NQS3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 NSRP1P1-201ENST00000444067 1693 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 SNORA70.6-201ENST00000383934 134 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 RN7SKP97-201ENST00000410966 333 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 RPS7P9-201ENST00000414704 586 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 HIGD1AP15-201ENST00000416198 280 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 REREP1Y-201ENST00000422655 198 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AL662874.1-201ENST00000426065 230 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC234064.1-201ENST00000436312 247 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 REREP2Y-201ENST00000439103 200 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC064862.4-201ENST00000442180 334 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 FHP1-201ENST00000442741 703 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 RPS26P30-201ENST00000443431 335 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AL591719.1-201ENST00000444669 744 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 HMGN1P36-201ENST00000446623 298 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 SETP20-201ENST00000457046 852 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 SNORD11.1-201ENST00000459482 85 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 MTND4LP2-201ENST00000502312 285 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 SNORA43.3-201ENST00000517240 103 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC112191.2-201ENST00000522428 333 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 MTCO1P40-201ENST00000574371 625 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC022022.2-201ENST00000602989 360 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 BNIP3P4-201ENST00000604946 565 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC093424.1-201ENST00000604999 338 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 FAM72A-208ENST00000607379 1139 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC139769.3-201ENST00000618383 175 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 ZNF663P-202ENST00000641770 1131 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 AL031595.2-201ENST00000624215 19071 ntBASIC5.38□□□□□ -1.55
NECTIN3Q9NQS3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms