Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 SAMMSON-226ENST00000642089 1582 ntBASIC4.36□□□□□ -1.71
RSPO3Q9BXY4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AP001273.1-201ENST00000624493 3152 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 SMG1P4-204ENST00000523028 4131 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 OR56B2P-201ENST00000317102 954 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 RN7SKP103-201ENST00000363848 320 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 MIR137-201ENST00000385223 102 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AL050305.1-201ENST00000399993 1230 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AL589647.1-201ENST00000402485 466 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC093162.1-201ENST00000419682 124 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC112498.1-201ENST00000444401 332 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC104651.2-201ENST00000447549 528 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AL591363.1-201ENST00000450091 483 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC234781.3-201ENST00000452540 973 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC079168.2-201ENST00000453977 416 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 RPS29P22-201ENST00000472363 168 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 IGLV2-34-201ENST00000490007 283 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 CEACAMP10-202ENST00000495431 496 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC021733.2-201ENST00000518830 497 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 BUD31P1-201ENST00000521828 359 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 PCNPP1-201ENST00000552501 511 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC087385.3-201ENST00000620477 187 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AP001005.3-201ENST00000622049 129 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AP002799.1-201ENST00000623552 423 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 LINC01355-201ENST00000566551 5444 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AL359922.3-201ENST00000624779 1670 ntBASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
RSPO3Q9BXY4 AC112198.2-201ENST00000426589 6996 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 MIR195-201ENST00000385194 87 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 Z97832.1-201ENST00000402490 328 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 RPL12P43-201ENST00000420608 499 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AL590762.4-201ENST00000425885 253 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 RBMY2QP-201ENST00000429799 1147 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AC097523.2-201ENST00000435551 652 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AC006466.1-201ENST00000438721 289 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 ATP5G1P3-201ENST00000463301 410 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AC104971.1-201ENST00000495117 578 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AK4P6-201ENST00000505168 528 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AC073358.1-201ENST00000505671 684 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AC021006.3-201ENST00000530771 192 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AC133555.2-201ENST00000550213 292 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 AC073091.2-201ENST00000603205 907 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 COX6CP4-201ENST00000605798 228 ntBASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
RSPO3Q9BXY4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms