Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TCP1P3-201ENST00000414406 1498 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC023421.1-201ENST00000590535 1785 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC068446.1-201ENST00000556425 1549 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 NUDT19P3-201ENST00000404698 555 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AL512430.2-201ENST00000406786 339 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 RPL12P9-201ENST00000412942 488 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 MTATP6P19-201ENST00000413797 659 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AL133325.1-201ENST00000421090 382 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 EI24P4-201ENST00000423683 1078 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC093655.2-201ENST00000425735 631 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 RPS4XP16-201ENST00000427198 791 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 SPRYD7P1-201ENST00000443861 570 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 RN7SL174P-201ENST00000475578 289 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 RN7SL447P-201ENST00000494711 245 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 SMARCE1P4-201ENST00000523647 241 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 OR4A46P-201ENST00000527255 933 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AL390334.1-201ENST00000556395 450 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 MIR3176-201ENST00000582210 90 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 FKBP1AP1-201ENST00000594588 318 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AP001033.2-201ENST00000609701 1003 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC090527.3-201ENST00000619041 548 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 AC083843.2-201ENST00000568248 6253 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 MTND4P31-201ENST00000425607 1343 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.69□□□□□ -1.66
NHLRC1Q6VVB1 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AL450345.1-202ENST00000605741 3881 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 RN7SKP153-201ENST00000365026 316 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 RPL21P67-201ENST00000402896 478 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 RNA5SP296-201ENST00000410523 111 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AL158073.1-201ENST00000426848 1104 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 RPL7L1P9-201ENST00000431298 745 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 CYCSP6-201ENST00000434498 302 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 CLUHP1-201ENST00000435012 1190 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 RPL12P46-201ENST00000436610 195 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AL353093.1-201ENST00000441292 436 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AC097499.1-201ENST00000444277 208 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 RPL31P44-201ENST00000447680 377 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 TPMTP4-201ENST00000450749 678 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AC074386.1-201ENST00000476560 767 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AC022133.1-201ENST00000490961 571 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AC005912.1-201ENST00000495392 255 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AC024558.1-201ENST00000505008 528 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 POLR2KP1-201ENST00000553226 168 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 MIR3936-201ENST00000584304 110 ntBASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.68□□□□□ -1.66
NHLRC1Q6VVB1 AC069307.1-201ENST00000602820 447 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms