Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 MIR323A-201ENST00000362199 86 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 MIR133B-201ENST00000362210 119 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 RNU6-543P-201ENST00000362576 108 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 MIR92A2-201ENST00000385299 75 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 SNORD65C-201ENST00000390962 71 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AL513325.1-201ENST00000417716 1034 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 TCEA1P2-201ENST00000420496 906 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC073069.1-201ENST00000428657 441 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC000041.1-201ENST00000439655 175 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 TRY2P-201ENST00000448860 689 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC147055.3-201ENST00000510547 851 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 RNU6-276P-201ENST00000516114 96 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 COX6B1P6-201ENST00000522347 255 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC021451.1-201ENST00000523498 1129 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 MTND1P6-201ENST00000523621 946 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 LRRC6P1-201ENST00000532188 885 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 OR4A43P-201ENST00000532938 908 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AP004607.2-201ENST00000533949 322 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 RN7SL356P-201ENST00000582228 248 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC108738.1-201ENST00000603703 237 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 FAM72A-208ENST00000607379 1139 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AL355816.1-201ENST00000607951 118 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC244107.2-201ENST00000611773 76 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AL162574.1-201ENST00000615702 950 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 AC090017.1-201ENST00000548612 1779 ntBASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PRICKLE4Q2TBC4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AC140134.1-201ENST00000511830 3544 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 RNA5SP335-201ENST00000363817 110 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 RNA5SP132-201ENST00000364725 118 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 MIR143-201ENST00000385300 106 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AL133388.1-201ENST00000404509 287 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AL512422.1-201ENST00000407033 553 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 SNORA11.3-201ENST00000408471 128 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AC234782.4-201ENST00000417646 1048 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 CHEK2P5-201ENST00000423877 246 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 MRPS21P2-201ENST00000424704 264 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 RPS27AP6-201ENST00000427962 448 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 ELOCP10-201ENST00000440624 327 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AL391987.1-201ENST00000441025 200 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 TVP23BP2-201ENST00000455082 615 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 RPL37P3-201ENST00000456825 293 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 RPL23AP71-201ENST00000470966 469 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 RN7SL174P-201ENST00000475578 289 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AL161747.1-201ENST00000480068 358 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 RN7SL547P-201ENST00000490793 290 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 RN7SL101P-201ENST00000496350 279 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AL136038.1-201ENST00000497246 351 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 AC097486.1-201ENST00000515331 210 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 RNA5SP362-201ENST00000516048 118 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 RNA5SP303-201ENST00000516192 130 ntBASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.04□□□□□ -1.6
PRICKLE4Q2TBC4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms