Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RN7SKP153-201ENST00000365026 316 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 BTF3P9-201ENST00000418784 283 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 AL354692.1-201ENST00000423044 315 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.48□□□□□ -1.53
HDAC4P56524 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.48□□□□□ -1.53
HDAC4P56524 PA2G4P6-201ENST00000438325 1197 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 RPS11P7-201ENST00000442125 465 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.48□□□□□ -1.53
HDAC4P56524 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.48□□□□□ -1.53
HDAC4P56524 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.48□□□□□ -1.53
HDAC4P56524 EIF2S2P5-201ENST00000457635 968 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 RPL7P40-201ENST00000481703 745 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 RPS4XP1-201ENST00000482189 787 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.48□□□□□ -1.53
HDAC4P56524 AC022133.1-201ENST00000490961 571 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 HAUS1P1-201ENST00000505275 832 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 BTG4P1-201ENST00000510421 183 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 AC016559.2-201ENST00000510759 359 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 AC010374.2-201ENST00000512933 535 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 BX510359.5-201ENST00000515651 304 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 MTND1P6-201ENST00000523621 946 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.48□□□□□ -1.53
HDAC4P56524 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.48□□□□□ -1.53
HDAC4P56524 AC127381.1-201ENST00000555979 939 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.48□□□□□ -1.53
HDAC4P56524 MTCYBP13-201ENST00000578634 1093 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 AC009597.2-201ENST00000604659 592 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 AC245389.2-201ENST00000616023 576 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 AC242843.1-201ENST00000618702 573 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 MIR6837-201ENST00000620884 64 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 AC095038.2-201ENST00000621464 1070 ntBASIC5.48□□□□□ -1.53
HDAC4P56524 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.48□□□□□ -1.53
HDAC4P56524 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.48□□□□□ -1.53
HDAC4P56524 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HDAC4P56524 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
HDAC4P56524 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HDAC4P56524 AC092747.4-201ENST00000620519 1861 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.47□□□□□ -1.53
HDAC4P56524 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.47□□□□□ -1.53
HDAC4P56524 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HDAC4P56524 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HDAC4P56524 NXF4-202ENST00000416098 1465 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HDAC4P56524 AC011755.1-201ENST00000623763 2049 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HDAC4P56524 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HDAC4P56524 U3.3-201ENST00000362986 216 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 RNU6-650P-201ENST00000365658 111 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.47□□□□□ -1.53
HDAC4P56524 SNORA67-201ENST00000384423 137 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 MT-TP-201ENST00000387461 68 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HDAC4P56524 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HDAC4P56524 OR51A6P-201ENST00000418680 1004 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AC108075.1-201ENST00000424692 529 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AC093655.2-201ENST00000425735 631 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.47□□□□□ -1.53
HDAC4P56524 ELOCP6-201ENST00000429066 328 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 TCEA1P3-201ENST00000443005 880 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.47□□□□□ -1.53
HDAC4P56524 AL133244.1-201ENST00000456007 258 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.47□□□□□ -1.53
HDAC4P56524 ELOCP12-201ENST00000458706 328 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 RPL5P13-201ENST00000462840 709 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HDAC4P56524 AC024558.1-201ENST00000505008 528 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.47□□□□□ -1.53
HDAC4P56524 AC021146.7-201ENST00000509604 775 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AC098976.1-201ENST00000513014 541 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AC006427.1-201ENST00000514359 712 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AC034244.2-201ENST00000514668 858 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 RN7SKP157-201ENST00000516174 282 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 IGHV3-63-201ENST00000518422 341 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.47□□□□□ -1.53
HDAC4P56524 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.47□□□□□ -1.53
HDAC4P56524 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HDAC4P56524 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HDAC4P56524 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.47□□□□□ -1.53
HDAC4P56524 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.47□□□□□ -1.53
HDAC4P56524 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HDAC4P56524 RN7SL708P-201ENST00000580952 299 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.47□□□□□ -1.53
HDAC4P56524 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.47□□□□□ -1.53
HDAC4P56524 BNIP3P31-201ENST00000604515 566 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AP000864.1-201ENST00000609424 650 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AL391834.1-201ENST00000609609 560 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AL356274.1-201ENST00000617064 410 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HDAC4P56524 AC010872.1-201ENST00000624225 675 ntBASIC5.47□□□□□ -1.53
HDAC4P56524 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms