Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CIITAP33076 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CIITAP33076 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CIITAP33076 AL022311.1-201ENST00000623726 19416 ntBASIC5.74□□□□□ -1.49
CIITAP33076 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.74□□□□□ -1.49
CIITAP33076 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.74□□□□□ -1.49
CIITAP33076 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CIITAP33076 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CIITAP33076 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CIITAP33076 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CIITAP33076 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
CIITAP33076 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CIITAP33076 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CIITAP33076 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CIITAP33076 RNA5SP455-201ENST00000365190 119 ntBASIC5.73□□□□□ -1.49
CIITAP33076 RNU6-1320P-201ENST00000390838 107 ntBASIC5.73□□□□□ -1.49
CIITAP33076 SNORD65-201ENST00000391079 73 ntBASIC5.73□□□□□ -1.49
CIITAP33076 RNU6-1269P-201ENST00000391139 107 ntBASIC5.73□□□□□ -1.49
CIITAP33076 GAPDHP15-201ENST00000398586 975 ntBASIC5.73□□□□□ -1.49
CIITAP33076 AC016769.2-201ENST00000414815 475 ntBASIC5.73□□□□□ -1.49
CIITAP33076 VN1R37P-201ENST00000419096 748 ntBASIC5.73□□□□□ -1.49
CIITAP33076 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.73□□□□□ -1.49
CIITAP33076 MTND4P24-201ENST00000424002 397 ntBASIC5.73□□□□□ -1.49
CIITAP33076 MTND4LP13-201ENST00000425022 298 ntBASIC5.73□□□□□ -1.49
CIITAP33076 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.73□□□□□ -1.49
CIITAP33076 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.73□□□□□ -1.49
CIITAP33076 VN1R54P-201ENST00000435210 1049 ntBASIC5.73□□□□□ -1.49
CIITAP33076 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.73□□□□□ -1.49
CIITAP33076 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.73□□□□□ -1.49
CIITAP33076 TCEA1P1-201ENST00000449716 880 ntBASIC5.73□□□□□ -1.49
CIITAP33076 RNU6-599P-201ENST00000459383 107 ntBASIC5.73□□□□□ -1.49
CIITAP33076 RNU6-1193P-201ENST00000459461 107 ntBASIC5.73□□□□□ -1.49
CIITAP33076 AC107015.1-201ENST00000466902 747 ntBASIC5.73□□□□□ -1.49
CIITAP33076 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.73□□□□□ -1.49
CIITAP33076 AC108729.1-201ENST00000487812 947 ntBASIC5.73□□□□□ -1.49
CIITAP33076 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.73□□□□□ -1.49
CIITAP33076 AC108157.1-201ENST00000510511 539 ntBASIC5.73□□□□□ -1.49
CIITAP33076 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.73□□□□□ -1.49
CIITAP33076 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.73□□□□□ -1.49
CIITAP33076 MIR4646-201ENST00000580775 63 ntBASIC5.73□□□□□ -1.49
CIITAP33076 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.73□□□□□ -1.49
CIITAP33076 MEMO1P5-201ENST00000604810 406 ntBASIC5.73□□□□□ -1.49
CIITAP33076 AC012213.4-201ENST00000606457 354 ntBASIC5.73□□□□□ -1.49
CIITAP33076 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.73□□□□□ -1.49
CIITAP33076 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.73□□□□□ -1.49
CIITAP33076 RNU6-368P-201ENST00000620928 107 ntBASIC5.73□□□□□ -1.49
CIITAP33076 RNU6-538P-201ENST00000622329 107 ntBASIC5.73□□□□□ -1.49
CIITAP33076 CASC19-222ENST00000641321 1173 ntBASIC5.73□□□□□ -1.49
CIITAP33076 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.73□□□□□ -1.49
CIITAP33076 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.73□□□□□ -1.49
CIITAP33076 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CIITAP33076 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CIITAP33076 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CIITAP33076 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CIITAP33076 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CIITAP33076 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.73□□□□□ -1.49
CIITAP33076 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CIITAP33076 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CIITAP33076 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CIITAP33076 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.72□□□□□ -1.49
CIITAP33076 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.72□□□□□ -1.49
CIITAP33076 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CIITAP33076 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.72□□□□□ -1.49
CIITAP33076 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CIITAP33076 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CIITAP33076 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CIITAP33076 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CIITAP33076 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CIITAP33076 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CIITAP33076 SNORA66-201ENST00000384792 133 ntBASIC5.72□□□□□ -1.49
CIITAP33076 AL589647.1-201ENST00000402485 466 ntBASIC5.72□□□□□ -1.49
CIITAP33076 AL035079.1-201ENST00000405210 287 ntBASIC5.72□□□□□ -1.49
CIITAP33076 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.72□□□□□ -1.49
CIITAP33076 GLUD1P9-201ENST00000420997 1173 ntBASIC5.72□□□□□ -1.49
CIITAP33076 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.72□□□□□ -1.49
CIITAP33076 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.72□□□□□ -1.49
CIITAP33076 RBMY2QP-201ENST00000429799 1147 ntBASIC5.72□□□□□ -1.49
CIITAP33076 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.72□□□□□ -1.49
CIITAP33076 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.72□□□□□ -1.49
CIITAP33076 Z99127.2-201ENST00000441426 334 ntBASIC5.72□□□□□ -1.49
CIITAP33076 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.72□□□□□ -1.49
CIITAP33076 HMGN1P5-201ENST00000448591 263 ntBASIC5.72□□□□□ -1.49
CIITAP33076 TRY2P-201ENST00000448860 689 ntBASIC5.72□□□□□ -1.49
CIITAP33076 RBMY2TP-201ENST00000451162 947 ntBASIC5.72□□□□□ -1.49
CIITAP33076 SEPT7P3-201ENST00000455017 621 ntBASIC5.72□□□□□ -1.49
CIITAP33076 AC104629.2-201ENST00000468627 598 ntBASIC5.72□□□□□ -1.49
CIITAP33076 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CIITAP33076 AC010350.1-201ENST00000504908 231 ntBASIC5.72□□□□□ -1.49
CIITAP33076 AC010468.3-201ENST00000508225 458 ntBASIC5.72□□□□□ -1.49
CIITAP33076 AC100784.1-201ENST00000522790 310 ntBASIC5.72□□□□□ -1.49
CIITAP33076 AC068339.2-201ENST00000534395 618 ntBASIC5.72□□□□□ -1.49
CIITAP33076 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.72□□□□□ -1.49
CIITAP33076 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.72□□□□□ -1.49
CIITAP33076 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.72□□□□□ -1.49
CIITAP33076 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.72□□□□□ -1.49
CIITAP33076 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.72□□□□□ -1.49
CIITAP33076 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.72□□□□□ -1.49
CIITAP33076 Z95327.3-201ENST00000610385 572 ntBASIC5.72□□□□□ -1.49
CIITAP33076 AC015722.2-201ENST00000622210 551 ntBASIC5.72□□□□□ -1.49
CIITAP33076 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms