Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ABCD3P28288 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.11□□□□□ -1.59
ABCD3P28288 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
ABCD3P28288 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
ABCD3P28288 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
ABCD3P28288 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 MIR143-201ENST00000385300 106 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 RN7SKP206-201ENST00000410823 293 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 RNU6-603P-201ENST00000411403 107 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.1□□□□□ -1.59
ABCD3P28288 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.1□□□□□ -1.59
ABCD3P28288 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.1□□□□□ -1.59
ABCD3P28288 RIMKLBP2-201ENST00000424737 654 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AC009965.2-201ENST00000425328 970 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 HMGN2P27-201ENST00000427352 270 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 RPS27AP6-201ENST00000427962 448 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 YWHAEP5-201ENST00000431545 765 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AL645568.2-201ENST00000432815 1337 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AC012075.1-201ENST00000436549 580 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.1□□□□□ -1.59
ABCD3P28288 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.1□□□□□ -1.59
ABCD3P28288 IGBP1P3-201ENST00000447449 1000 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.1□□□□□ -1.59
ABCD3P28288 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.1□□□□□ -1.59
ABCD3P28288 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.1□□□□□ -1.59
ABCD3P28288 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 RPL23AP71-201ENST00000470966 469 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AC046144.1-201ENST00000478559 1853 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 MTCO1P6-201ENST00000481192 1384 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.1□□□□□ -1.59
ABCD3P28288 AL136038.1-201ENST00000497246 351 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AL035404.1-201ENST00000497982 568 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AC106872.4-201ENST00000510050 523 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.1□□□□□ -1.59
ABCD3P28288 COX6B1P6-201ENST00000522347 255 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
ABCD3P28288 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ABCD3P28288 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
ABCD3P28288 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 MTND4LP24-201ENST00000572277 291 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.1□□□□□ -1.59
ABCD3P28288 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.1□□□□□ -1.59
ABCD3P28288 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.1□□□□□ -1.59
ABCD3P28288 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.1□□□□□ -1.59
ABCD3P28288 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 FAM72A-208ENST00000607379 1139 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AC018754.1-201ENST00000607486 925 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AC023509.5-201ENST00000617434 807 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AL603750.1-201ENST00000624216 1717 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AC092162.3-201ENST00000624511 1624 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.1□□□□□ -1.59
ABCD3P28288 AC099654.8-201ENST00000637757 681 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.1□□□□□ -1.59
ABCD3P28288 MAPK10-328ENST00000641553 4009 ntBASIC5.1□□□□□ -1.59
ABCD3P28288 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ABCD3P28288 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
ABCD3P28288 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.1□□□□□ -1.59
ABCD3P28288 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
ABCD3P28288 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ABCD3P28288 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.09□□□□□ -1.59
ABCD3P28288 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
ABCD3P28288 AC114774.1-201ENST00000507410 1770 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ABCD3P28288 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ABCD3P28288 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.09□□□□□ -1.59
ABCD3P28288 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ABCD3P28288 RNA5SP319-201ENST00000362768 119 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.09□□□□□ -1.59
ABCD3P28288 MIR525-201ENST00000384978 85 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 MIR122-201ENST00000385044 85 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
ABCD3P28288 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.09□□□□□ -1.59
ABCD3P28288 AC211486.3-201ENST00000412694 621 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 RPSAP35-201ENST00000413753 818 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 Z93019.1-201ENST00000416450 973 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
ABCD3P28288 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.09□□□□□ -1.59
ABCD3P28288 RPS26P47-201ENST00000427219 348 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 AL121776.1-201ENST00000429337 372 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 RPL7P56-201ENST00000429441 717 ntBASIC5.09□□□□□ -1.59
ABCD3P28288 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms