Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
HMGB1P09429 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGB1P09429 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HMGB1P09429 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMGB1P09429 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGB1P09429 AL139811.1-201ENST00000424779 2299 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
HMGB1P09429 OR4K17-201ENST00000315543 1032 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HMGB1P09429 RNA5SP453-201ENST00000362503 119 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 SNORA64.1-201ENST00000362600 132 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGB1P09429 RNU6-468P-201ENST00000384003 109 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGB1P09429 RN7SKP240-201ENST00000410583 375 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGB1P09429 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGB1P09429 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGB1P09429 AC004448.2-201ENST00000422360 586 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGB1P09429 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGB1P09429 LINC02210-201ENST00000444561 288 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGB1P09429 AC026348.1-201ENST00000462549 1053 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 RPL37P6-202ENST00000464216 403 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGB1P09429 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 RPS17P11-201ENST00000474297 293 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 AC087672.1-201ENST00000479876 766 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGB1P09429 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGB1P09429 DUTP7-201ENST00000507982 486 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.68□□□□□ -1.34
HMGB1P09429 MTCO3P27-201ENST00000514397 196 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.68□□□□□ -1.34
HMGB1P09429 AF279873.1-201ENST00000523393 313 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.68□□□□□ -1.34
HMGB1P09429 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.68□□□□□ -1.34
HMGB1P09429 AC122688.1-201ENST00000541494 223 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGB1P09429 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGB1P09429 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGB1P09429 IGBP1P1-201ENST00000554337 1009 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 HSPE1P2-201ENST00000554777 306 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGB1P09429 CYP2C60P-201ENST00000566088 139 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGB1P09429 AP005119.2-201ENST00000579735 1105 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 H3F3BP2-201ENST00000583907 357 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.68□□□□□ -1.34
HMGB1P09429 AL359535.1-201ENST00000612100 1087 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 AL096712.1-201ENST00000614561 159 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGB1P09429 AC021766.1-201ENST00000624404 741 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMGB1P09429 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HMGB1P09429 AC087565.3-203ENST00000641018 837 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HMGB1P09429 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HMGB1P09429 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.68□□□□□ -1.34
HMGB1P09429 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMGB1P09429 AL136520.1-201ENST00000600311 1322 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HMGB1P09429 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.68□□□□□ -1.34
HMGB1P09429 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGB1P09429 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HMGB1P09429 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.67□□□□□ -1.34
HMGB1P09429 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.67□□□□□ -1.34
HMGB1P09429 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HMGB1P09429 RN7SKP185-201ENST00000362813 326 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 RN7SKP74-201ENST00000362849 309 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 RNA5SP326-201ENST00000363209 110 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HMGB1P09429 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HMGB1P09429 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HMGB1P09429 HMGN1P20-201ENST00000411849 300 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.67□□□□□ -1.34
HMGB1P09429 AL450992.3-201ENST00000413192 568 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 RPS6P23-201ENST00000413224 722 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.67□□□□□ -1.34
HMGB1P09429 RIMKLBP2-201ENST00000424737 654 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AC127526.2-201ENST00000426436 775 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AC115283.1-201ENST00000427353 400 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.67□□□□□ -1.34
HMGB1P09429 ELOCP6-201ENST00000429066 328 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 BX276092.6-201ENST00000430476 250 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.67□□□□□ -1.34
HMGB1P09429 AC138761.5-201ENST00000433967 325 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.67□□□□□ -1.34
HMGB1P09429 AC099670.2-201ENST00000435130 321 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.67□□□□□ -1.34
HMGB1P09429 IGHV5-78-201ENST00000450948 295 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AL445665.1-202ENST00000452436 324 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 BX276092.8-201ENST00000455722 250 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 ELOCP12-201ENST00000458706 328 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 RPS20P21-201ENST00000466859 343 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.67□□□□□ -1.34
HMGB1P09429 IGLV3-24-201ENST00000517477 197 ntBASIC6.67□□□□□ -1.34
HMGB1P09429 IGJP1-201ENST00000522682 475 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms