Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AC091868.1-201ENST00000508746 304 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AL390726.5-202ENST00000564800 256 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 SNORD91B-202ENST00000608459 222 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 MAPK10-303ENST00000641324 3959 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AL442639.1-201ENST00000625030 1899 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC109780.1-201ENST00000451768 1344 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC007068.1-201ENST00000396690 844 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 RN7SKP97-201ENST00000410966 333 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 FABP7P1-201ENST00000424004 391 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AL356390.1-201ENST00000455684 397 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC104849.1-201ENST00000462623 405 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC090142.1-201ENST00000465776 462 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 RFPL4AP3-201ENST00000515267 345 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 OR5AZ1P-201ENST00000527448 943 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC021006.3-201ENST00000530771 192 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 EDDM3DP-201ENST00000554692 434 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC073137.1-201ENST00000605636 634 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 OR7A19P-201ENST00000608051 733 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC016769.4-201ENST00000616893 535 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AL031119.1-201ENST00000404707 1879 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 IRF5P1-201ENST00000504852 2164 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 MAPK10-286ENST00000641208 8747 ntBASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS29Q9UBQ0 MAPK10-263ENST00000641052 4307 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 RARSP1-201ENST00000542842 1418 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 RN7SKP115-201ENST00000363177 317 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 MIR921-201ENST00000401133 56 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 DPPA2P3-201ENST00000411853 655 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AL591848.1-201ENST00000413092 322 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 AC012519.1-201ENST00000424588 610 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 OR2B7P-201ENST00000429302 934 ntBASIC4.5□□□□□ -1.69
VPS29Q9UBQ0 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms