Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
COPB1P53618 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPB1P53618 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPB1P53618 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
COPB1P53618 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COPB1P53618 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
COPB1P53618 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPB1P53618 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.7□□□□□ -1.5
COPB1P53618 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.7□□□□□ -1.5
COPB1P53618 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPB1P53618 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPB1P53618 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
COPB1P53618 RNA5SP319-201ENST00000362768 119 ntBASIC5.7□□□□□ -1.5
COPB1P53618 U3.25-201ENST00000391209 220 ntBASIC5.7□□□□□ -1.5
COPB1P53618 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPB1P53618 AL390316.1-201ENST00000406279 553 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC5.7□□□□□ -1.5
COPB1P53618 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.7□□□□□ -1.5
COPB1P53618 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.7□□□□□ -1.5
COPB1P53618 MTATP6P26-201ENST00000445926 662 ntBASIC5.7□□□□□ -1.5
COPB1P53618 MTND1P33-201ENST00000446251 917 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.7□□□□□ -1.5
COPB1P53618 AC012512.1-201ENST00000446594 718 ntBASIC5.7□□□□□ -1.5
COPB1P53618 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPB1P53618 AL161722.1-201ENST00000446972 1032 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.7□□□□□ -1.5
COPB1P53618 MTND1P31-201ENST00000449206 961 ntBASIC5.7□□□□□ -1.5
COPB1P53618 BUD31P2-201ENST00000449374 300 ntBASIC5.7□□□□□ -1.5
COPB1P53618 CCRL1P1-201ENST00000449542 1053 ntBASIC5.7□□□□□ -1.5
COPB1P53618 MTND2P8-201ENST00000450555 1025 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC104629.2-201ENST00000468627 598 ntBASIC5.7□□□□□ -1.5
COPB1P53618 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.7□□□□□ -1.5
COPB1P53618 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.7□□□□□ -1.5
COPB1P53618 RPL7P40-201ENST00000481703 745 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC021146.5-201ENST00000503544 545 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC112518.2-201ENST00000508565 425 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.7□□□□□ -1.5
COPB1P53618 AC010476.1-201ENST00000519111 851 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.7□□□□□ -1.5
COPB1P53618 OR8G5-201ENST00000524943 1041 ntBASIC5.7□□□□□ -1.5
COPB1P53618 HMGB1P40-201ENST00000525121 540 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.7□□□□□ -1.5
COPB1P53618 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.7□□□□□ -1.5
COPB1P53618 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COPB1P53618 AC022404.1-201ENST00000555320 273 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.7□□□□□ -1.5
COPB1P53618 AC023825.1-201ENST00000566704 1030 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC009852.2-201ENST00000567898 485 ntBASIC5.7□□□□□ -1.5
COPB1P53618 MIR4509-3-201ENST00000578671 94 ntBASIC5.7□□□□□ -1.5
COPB1P53618 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPB1P53618 MIR4509-2-201ENST00000583920 94 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.7□□□□□ -1.5
COPB1P53618 AC079880.2-201ENST00000603790 1213 ntBASIC5.7□□□□□ -1.5
COPB1P53618 AC018695.5-201ENST00000605872 315 ntBASIC5.7□□□□□ -1.5
COPB1P53618 MIR4509-1-201ENST00000618224 94 ntBASIC5.7□□□□□ -1.5
COPB1P53618 BX005214.3-202ENST00000619809 325 ntBASIC5.7□□□□□ -1.5
COPB1P53618 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.7□□□□□ -1.5
COPB1P53618 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPB1P53618 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COPB1P53618 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPB1P53618 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.7□□□□□ -1.5
COPB1P53618 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COPB1P53618 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPB1P53618 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COPB1P53618 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COPB1P53618 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 CR788268.1-201ENST00000603931 1809 ntBASIC5.69□□□□□ -1.5
COPB1P53618 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPB1P53618 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 AC063976.2-201ENST00000425667 3556 ntBASIC5.69□□□□□ -1.5
COPB1P53618 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
COPB1P53618 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPB1P53618 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPB1P53618 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 RNU6-354P-201ENST00000383862 107 ntBASIC5.69□□□□□ -1.5
COPB1P53618 RNU6-610P-201ENST00000384264 107 ntBASIC5.69□□□□□ -1.5
COPB1P53618 AL035079.1-201ENST00000405210 287 ntBASIC5.69□□□□□ -1.5
COPB1P53618 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPB1P53618 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.69□□□□□ -1.5
COPB1P53618 AC012075.1-201ENST00000436549 580 ntBASIC5.69□□□□□ -1.5
COPB1P53618 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.69□□□□□ -1.5
COPB1P53618 AC073909.1-201ENST00000447112 999 ntBASIC5.69□□□□□ -1.5
COPB1P53618 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 MTCO2P6-201ENST00000463134 685 ntBASIC5.69□□□□□ -1.5
COPB1P53618 AC008379.1-201ENST00000463655 464 ntBASIC5.69□□□□□ -1.5
COPB1P53618 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COPB1P53618 HMGB1P38-201ENST00000490557 577 ntBASIC5.69□□□□□ -1.5
COPB1P53618 AC093720.1-201ENST00000505681 714 ntBASIC5.69□□□□□ -1.5
COPB1P53618 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.69□□□□□ -1.5
COPB1P53618 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.69□□□□□ -1.5
COPB1P53618 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.69□□□□□ -1.5
COPB1P53618 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
COPB1P53618 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms