Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb2S4R1M3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
H2afb2S4R1M3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Gm11539-201ENSMUST00000119837 557 ntBASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Gm13436-201ENSMUST00000120418 567 ntBASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2afb2S4R1M3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
H2afb2S4R1M3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Gm7370-201ENSMUST00000219471 767 ntBASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.7■□□□□ 0.26
H2afb2S4R1M3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2afb2S4R1M3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Gm16061-201ENSMUST00000122167 857 ntBASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Gm13474-201ENSMUST00000122466 815 ntBASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.68■□□□□ 0.26
H2afb2S4R1M3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms