Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cldn3Q9Z0G9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cldn3Q9Z0G9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Gm7213-201ENSMUST00000215977 950 ntBASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cldn3Q9Z0G9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cldn3Q9Z0G9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cldn3Q9Z0G9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cldn3Q9Z0G9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Gm9987-201ENSMUST00000069768 567 ntBASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.89■□□□□ 0.29
Cldn3Q9Z0G9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.88■□□□□ 0.29
Cldn3Q9Z0G9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn3Q9Z0G9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn3Q9Z0G9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn3Q9Z0G9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cldn3Q9Z0G9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn3Q9Z0G9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cldn3Q9Z0G9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.87■□□□□ 0.29
Cldn3Q9Z0G9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms