Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.4■□□□□ 0.06
ClcnkaQ9WUB7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ClcnkaQ9WUB7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ClcnkaQ9WUB7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Gm18958-201ENSMUST00000174258 762 ntBASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
ClcnkaQ9WUB7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Gm11539-201ENSMUST00000119837 557 ntBASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Gm13436-201ENSMUST00000120418 567 ntBASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ClcnkaQ9WUB7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms