Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.2□□□□□ -0.14
Col13a1Q9R1N9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col13a1Q9R1N9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Gm2213-201ENSMUST00000197485 688 ntBASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col13a1Q9R1N9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Gm1401-201ENSMUST00000122048 772 ntBASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Gm7063-201ENSMUST00000186840 981 ntBASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.17□□□□□ -0.14
Col13a1Q9R1N9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 Gm8000-201ENSMUST00000188378 592 ntBASIC14.16□□□□□ -0.14
Col13a1Q9R1N9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms