Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.3■□□□□ 0.2
Cdh17Q9R100 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Cdh17Q9R100 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Odf3b-204ENSMUST00000227834 930 ntBASIC16.29■□□□□ 0.2
Cdh17Q9R100 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdh17Q9R100 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.28■□□□□ 0.2
Cdh17Q9R100 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.28■□□□□ 0.2
Cdh17Q9R100 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh17Q9R100 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh17Q9R100 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Gm3375-201ENSMUST00000203929 796 ntBASIC16.27■□□□□ 0.2
Cdh17Q9R100 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdh17Q9R100 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh17Q9R100 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh17Q9R100 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh17Q9R100 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh17Q9R100 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh17Q9R100 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh17Q9R100 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Gm715-201ENSMUST00000117865 831 ntBASIC16.26■□□□□ 0.19
Cdh17Q9R100 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.26■□□□□ 0.19
Cdh17Q9R100 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.26■□□□□ 0.19
Cdh17Q9R100 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh17Q9R100 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.26■□□□□ 0.19
Cdh17Q9R100 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh17Q9R100 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms