Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Gm13401-201ENSMUST00000117074 291 ntBASIC14.84□□□□□ -0.03
Nubp2Q9R061 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nubp2Q9R061 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nubp2Q9R061 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Nubp2Q9R061 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nubp2Q9R061 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.83□□□□□ -0.03
Nubp2Q9R061 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nubp2Q9R061 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nubp2Q9R061 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp2Q9R061 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp2Q9R061 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.83□□□□□ -0.04
Nubp2Q9R061 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp2Q9R061 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.83□□□□□ -0.04
Nubp2Q9R061 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.83□□□□□ -0.04
Nubp2Q9R061 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nubp2Q9R061 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Nubp2Q9R061 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nubp2Q9R061 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.82□□□□□ -0.04
Nubp2Q9R061 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nubp2Q9R061 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Gm13216-201ENSMUST00000117145 591 ntBASIC14.81□□□□□ -0.04
Nubp2Q9R061 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Gm10231-201ENSMUST00000181584 441 ntBASIC14.81□□□□□ -0.04
Nubp2Q9R061 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Gm10175-202ENSMUST00000208752 441 ntBASIC14.81□□□□□ -0.04
Nubp2Q9R061 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.81□□□□□ -0.04
Nubp2Q9R061 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms