Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chaf1aQ9QWF0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.72■□□□□ 0.59
Chaf1aQ9QWF0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1aQ9QWF0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1aQ9QWF0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.72■□□□□ 0.59
Chaf1aQ9QWF0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Chaf1aQ9QWF0 Gm13216-201ENSMUST00000117145 591 ntBASIC18.72■□□□□ 0.59
Chaf1aQ9QWF0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.72■□□□□ 0.59
Chaf1aQ9QWF0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.72■□□□□ 0.59
Chaf1aQ9QWF0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1aQ9QWF0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1aQ9QWF0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chaf1aQ9QWF0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Gm5643-201ENSMUST00000117081 966 ntBASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Chaf1aQ9QWF0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Chaf1aQ9QWF0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Gm10653-202ENSMUST00000139570 835 ntBASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Chaf1aQ9QWF0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.69■□□□□ 0.58
Chaf1aQ9QWF0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chaf1aQ9QWF0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chaf1aQ9QWF0 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms