Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Gm25509-201ENSMUST00000116985 106 ntBASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Msh5Q9QUM7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Gm715-201ENSMUST00000117865 831 ntBASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh5Q9QUM7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Gm12085-201ENSMUST00000119263 940 ntBASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh5Q9QUM7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Msh5Q9QUM7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Msh5Q9QUM7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms