Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cpne8Q9DC53 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cpne8Q9DC53 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Cpne8Q9DC53 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cpne8Q9DC53 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cpne8Q9DC53 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Gm7370-201ENSMUST00000219471 767 ntBASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cpne8Q9DC53 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cpne8Q9DC53 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne8Q9DC53 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne8Q9DC53 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.41■□□□□ 0.38
Cpne8Q9DC53 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne8Q9DC53 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cpne8Q9DC53 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms