Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ssmem1Q9D9Y8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ssmem1Q9D9Y8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ssmem1Q9D9Y8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Ssmem1Q9D9Y8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.46□□□□□ -0.1
Ssmem1Q9D9Y8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ssmem1Q9D9Y8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ssmem1Q9D9Y8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ssmem1Q9D9Y8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ssmem1Q9D9Y8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.46□□□□□ -0.1
Ssmem1Q9D9Y8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Gm5587-201ENSMUST00000206270 674 ntBASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ssmem1Q9D9Y8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Gm18115-201ENSMUST00000221209 621 ntBASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ssmem1Q9D9Y8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ssmem1Q9D9Y8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms