Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Gm17661-201ENSMUST00000170317 270 ntBASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Chmp5Q9D7S9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Chmp5Q9D7S9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chmp5Q9D7S9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Gm10602-201ENSMUST00000098239 609 ntBASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chmp5Q9D7S9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chmp5Q9D7S9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Chmp5Q9D7S9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
Chmp5Q9D7S9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms