Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Gm15565-201ENSMUST00000118890 427 ntBASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf225Q9D7D1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Gm22923-201ENSMUST00000174952 110 ntBASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Gm2274-201ENSMUST00000184539 609 ntBASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.55■□□□□ 0.4
Rnf225Q9D7D1 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Gm44882-201ENSMUST00000205702 802 ntBASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf225Q9D7D1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.53■□□□□ 0.4
Rnf225Q9D7D1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Gm7889-201ENSMUST00000185591 958 ntBASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rnf225Q9D7D1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf225Q9D7D1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms