Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ShpkQ9D5J6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ShpkQ9D5J6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.06□□□□□ -0.16
ShpkQ9D5J6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Gm43173-201ENSMUST00000202246 593 ntBASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ShpkQ9D5J6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ShpkQ9D5J6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ShpkQ9D5J6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShpkQ9D5J6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShpkQ9D5J6 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShpkQ9D5J6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShpkQ9D5J6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ShpkQ9D5J6 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShpkQ9D5J6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShpkQ9D5J6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ShpkQ9D5J6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ShpkQ9D5J6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.02□□□□□ -0.17
ShpkQ9D5J6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.02□□□□□ -0.17
ShpkQ9D5J6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ShpkQ9D5J6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ShpkQ9D5J6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ShpkQ9D5J6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ShpkQ9D5J6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ShpkQ9D5J6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ShpkQ9D5J6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ShpkQ9D5J6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms