Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim42Q9D2H5 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim42Q9D2H5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Gm7290-201ENSMUST00000104990 617 ntBASIC16.72■□□□□ 0.27
Trim42Q9D2H5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Gm12918-201ENSMUST00000120234 636 ntBASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Gm15710-201ENSMUST00000121821 636 ntBASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Gm5075-201ENSMUST00000196916 622 ntBASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Gm18671-201ENSMUST00000214826 683 ntBASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim42Q9D2H5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Gm18284-201ENSMUST00000172604 624 ntBASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Mir6349-201ENSMUST00000184059 97 ntBASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim42Q9D2H5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Trim42Q9D2H5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim42Q9D2H5 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim42Q9D2H5 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim42Q9D2H5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim42Q9D2H5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms