Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chaf1bQ9D0N7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Chaf1bQ9D0N7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Chaf1bQ9D0N7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chaf1bQ9D0N7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.79■□□□□ 0.12
Chaf1bQ9D0N7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.79■□□□□ 0.12
Chaf1bQ9D0N7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chaf1bQ9D0N7 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chaf1bQ9D0N7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chaf1bQ9D0N7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Gm26524-201ENSMUST00000192339 390 ntBASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.78■□□□□ 0.12
Chaf1bQ9D0N7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Gm13148-201ENSMUST00000118892 745 ntBASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Gm11643-201ENSMUST00000119578 864 ntBASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Gm6576-201ENSMUST00000169678 883 ntBASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Rab3c-203ENSMUST00000224180 967 ntBASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chaf1bQ9D0N7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Chaf1bQ9D0N7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.77■□□□□ 0.11
Chaf1bQ9D0N7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chaf1bQ9D0N7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Chaf1bQ9D0N7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chaf1bQ9D0N7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chaf1bQ9D0N7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chaf1bQ9D0N7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chaf1bQ9D0N7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Chaf1bQ9D0N7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Gm10849-201ENSMUST00000100397 618 ntBASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Gm42569-201ENSMUST00000200539 472 ntBASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chaf1bQ9D0N7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.75■□□□□ 0.11
Chaf1bQ9D0N7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms