Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc43Q9CR29 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc43Q9CR29 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc43Q9CR29 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.58■□□□□ 0.57
Ccdc43Q9CR29 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc43Q9CR29 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.58■□□□□ 0.57
Ccdc43Q9CR29 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc43Q9CR29 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc43Q9CR29 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc43Q9CR29 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Gm17661-201ENSMUST00000170317 270 ntBASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Gm38027-201ENSMUST00000192315 235 ntBASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Gm9731-201ENSMUST00000209480 747 ntBASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ccdc43Q9CR29 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Gm44443-201ENSMUST00000204396 5633 ntBASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc43Q9CR29 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc43Q9CR29 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc43Q9CR29 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms