Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Mir1668-201ENSMUST00000184114 107 ntBASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retreg3Q9CQV4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.79■□□□□ 0.28
Retreg3Q9CQV4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Gm13216-201ENSMUST00000117145 591 ntBASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Gm20614-201ENSMUST00000177106 632 ntBASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retreg3Q9CQV4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.77■□□□□ 0.28
Retreg3Q9CQV4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retreg3Q9CQV4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retreg3Q9CQV4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retreg3Q9CQV4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retreg3Q9CQV4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
Retreg3Q9CQV4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg3Q9CQV4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg3Q9CQV4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg3Q9CQV4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.76■□□□□ 0.27
Retreg3Q9CQV4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg3Q9CQV4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retreg3Q9CQV4 Gm14859-201ENSMUST00000117752 357 ntBASIC16.76■□□□□ 0.27
Retreg3Q9CQV4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.76■□□□□ 0.27
Retreg3Q9CQV4 Gm6345-202ENSMUST00000180900 204 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms