Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chchd1Q9CQA6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Gm22325-201ENSMUST00000158904 308 ntBASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chchd1Q9CQA6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Chchd1Q9CQA6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chchd1Q9CQA6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chchd1Q9CQA6 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.68□□□□□ -0.38
Chchd1Q9CQA6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms