Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim16Q99PP9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Gm12085-201ENSMUST00000119263 940 ntBASIC16.38■□□□□ 0.21
Trim16Q99PP9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.38■□□□□ 0.21
Trim16Q99PP9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim16Q99PP9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.37■□□□□ 0.21
Trim16Q99PP9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.37■□□□□ 0.21
Trim16Q99PP9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.37■□□□□ 0.21
Trim16Q99PP9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim16Q99PP9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim16Q99PP9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.36■□□□□ 0.21
Trim16Q99PP9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Gm37055-201ENSMUST00000191866 133 ntBASIC16.36■□□□□ 0.21
Trim16Q99PP9 Gm3375-201ENSMUST00000203929 796 ntBASIC16.36■□□□□ 0.21
Trim16Q99PP9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim16Q99PP9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim16Q99PP9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim16Q99PP9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim16Q99PP9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim16Q99PP9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim16Q99PP9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trim16Q99PP9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trim16Q99PP9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim16Q99PP9 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.35■□□□□ 0.21
Trim16Q99PP9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.35■□□□□ 0.21
Trim16Q99PP9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim16Q99PP9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim16Q99PP9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Gm38027-201ENSMUST00000192315 235 ntBASIC16.34■□□□□ 0.21
Trim16Q99PP9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.34■□□□□ 0.21
Trim16Q99PP9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.34■□□□□ 0.21
Trim16Q99PP9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim16Q99PP9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim16Q99PP9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms