Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trim33Q99PP7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim33Q99PP7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim33Q99PP7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim33Q99PP7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim33Q99PP7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim33Q99PP7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trim33Q99PP7 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.58■□□□□ 0.24
Trim33Q99PP7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Gm7889-201ENSMUST00000185591 958 ntBASIC16.58■□□□□ 0.24
Trim33Q99PP7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.58■□□□□ 0.24
Trim33Q99PP7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trim33Q99PP7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.57■□□□□ 0.24
Trim33Q99PP7 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.57■□□□□ 0.24
Trim33Q99PP7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim33Q99PP7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Gm18958-201ENSMUST00000174258 762 ntBASIC16.56■□□□□ 0.24
Trim33Q99PP7 Gm2274-201ENSMUST00000184539 609 ntBASIC16.56■□□□□ 0.24
Trim33Q99PP7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.56■□□□□ 0.24
Trim33Q99PP7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim33Q99PP7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Gm6433-201ENSMUST00000118634 875 ntBASIC16.55■□□□□ 0.24
Trim33Q99PP7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.55■□□□□ 0.24
Trim33Q99PP7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim33Q99PP7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.54■□□□□ 0.24
Trim33Q99PP7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Mir7071-201ENSMUST00000184847 69 ntBASIC16.54■□□□□ 0.24
Trim33Q99PP7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim33Q99PP7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.54■□□□□ 0.24
Trim33Q99PP7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim33Q99PP7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms