Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.34□□□□□ -0.11
Smim3Q99PE5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim3Q99PE5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Smim3Q99PE5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smim3Q99PE5 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.33□□□□□ -0.11
Smim3Q99PE5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Smim3Q99PE5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Gm6420-201ENSMUST00000193885 723 ntBASIC14.33□□□□□ -0.12
Smim3Q99PE5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.33□□□□□ -0.12
Smim3Q99PE5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.32□□□□□ -0.12
Smim3Q99PE5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.32□□□□□ -0.12
Smim3Q99PE5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Smim3Q99PE5 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.31□□□□□ -0.12
Smim3Q99PE5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.31□□□□□ -0.12
Smim3Q99PE5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim3Q99PE5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim3Q99PE5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smim3Q99PE5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim3Q99PE5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim3Q99PE5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smim3Q99PE5 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim3Q99PE5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim3Q99PE5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim3Q99PE5 Gm13401-201ENSMUST00000117074 291 ntBASIC14.3□□□□□ -0.12
Smim3Q99PE5 Gm13234-201ENSMUST00000120010 747 ntBASIC14.3□□□□□ -0.12
Smim3Q99PE5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.3□□□□□ -0.12
Smim3Q99PE5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smim3Q99PE5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim3Q99PE5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms