Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb6Q91XZ4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Mir1668-201ENSMUST00000184114 107 ntBASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Mir6982-201ENSMUST00000184354 68 ntBASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Gm45058-201ENSMUST00000205810 766 ntBASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb6Q91XZ4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Gm44450-201ENSMUST00000199528 114 ntBASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb6Q91XZ4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Mir5130-201ENSMUST00000175160 84 ntBASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Gm18959-201ENSMUST00000208954 655 ntBASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb6Q91XZ4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb6Q91XZ4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb6Q91XZ4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms