Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga4Q91XY4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhga4Q91XY4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Gm10013-201ENSMUST00000106074 672 ntBASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga4Q91XY4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
Pcdhga4Q91XY4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga4Q91XY4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Gm18101-201ENSMUST00000215769 548 ntBASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga4Q91XY4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms