Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb11Q91UZ8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Pcdhb11Q91UZ8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb11Q91UZ8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Gm22697-201ENSMUST00000175194 63 ntBASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.09■□□□□ 0.33
Pcdhb11Q91UZ8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms