Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.76■□□□□ 0.43
TraipQ8VIG6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.76■□□□□ 0.43
TraipQ8VIG6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TraipQ8VIG6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.75■□□□□ 0.43
TraipQ8VIG6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
TraipQ8VIG6 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TraipQ8VIG6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Gm24589-201ENSMUST00000116692 94 ntBASIC17.74■□□□□ 0.43
TraipQ8VIG6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TraipQ8VIG6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.73■□□□□ 0.43
TraipQ8VIG6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TraipQ8VIG6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Haglr-201ENSMUST00000100000 2085 ntBASIC17.72■□□□□ 0.43
TraipQ8VIG6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Gm27459-201ENSMUST00000184860 107 ntBASIC17.72■□□□□ 0.43
TraipQ8VIG6 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.72■□□□□ 0.43
TraipQ8VIG6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TraipQ8VIG6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TraipQ8VIG6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms