Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.31■□□□□ 0.36
Trim60Q8VI40 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim60Q8VI40 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Gm12527-201ENSMUST00000117967 564 ntBASIC17.3■□□□□ 0.36
Trim60Q8VI40 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim60Q8VI40 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Gm27011-201ENSMUST00000182352 972 ntBASIC17.3■□□□□ 0.36
Trim60Q8VI40 Gm27000-201ENSMUST00000182943 842 ntBASIC17.3■□□□□ 0.36
Trim60Q8VI40 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim60Q8VI40 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Il3ra-202ENSMUST00000223589 738 ntBASIC17.29■□□□□ 0.36
Trim60Q8VI40 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim60Q8VI40 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim60Q8VI40 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Trim60Q8VI40 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim60Q8VI40 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim60Q8VI40 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim60Q8VI40 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim60Q8VI40 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.27■□□□□ 0.36
Trim60Q8VI40 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.27■□□□□ 0.36
Trim60Q8VI40 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Trim60Q8VI40 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim60Q8VI40 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim60Q8VI40 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Trim60Q8VI40 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.27■□□□□ 0.36
Trim60Q8VI40 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim60Q8VI40 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim60Q8VI40 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim60Q8VI40 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim60Q8VI40 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trim60Q8VI40 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim60Q8VI40 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.27■□□□□ 0.35
Trim60Q8VI40 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Trim60Q8VI40 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.27■□□□□ 0.35
Trim60Q8VI40 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim60Q8VI40 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Gm7638-201ENSMUST00000121348 967 ntBASIC17.26■□□□□ 0.35
Trim60Q8VI40 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Gm18958-201ENSMUST00000174258 762 ntBASIC17.26■□□□□ 0.35
Trim60Q8VI40 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim60Q8VI40 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms