Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf8Q8VC56 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf8Q8VC56 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Gm10517-202ENSMUST00000192970 758 ntBASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Gm10252-201ENSMUST00000209541 832 ntBASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf8Q8VC56 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Timm23-208ENSMUST00000226683 750 ntBASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Odf3b-204ENSMUST00000227834 930 ntBASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rnf8Q8VC56 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Gm13216-201ENSMUST00000117145 591 ntBASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rnf8Q8VC56 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms