Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nup35Q8R4R6 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Gm10849-201ENSMUST00000100397 618 ntBASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nup35Q8R4R6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nup35Q8R4R6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.66□□□□□ -0.22
Nup35Q8R4R6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.66□□□□□ -0.22
Nup35Q8R4R6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Gm2559-201ENSMUST00000201323 363 ntBASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Gm4974-201ENSMUST00000209974 875 ntBASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup35Q8R4R6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.65□□□□□ -0.22
Nup35Q8R4R6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nup35Q8R4R6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms