Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nudcd3Q8R1N4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nudcd3Q8R1N4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nudcd3Q8R1N4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nudcd3Q8R1N4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nudcd3Q8R1N4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nudcd3Q8R1N4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nudcd3Q8R1N4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nudcd3Q8R1N4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nudcd3Q8R1N4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Nudcd3Q8R1N4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nudcd3Q8R1N4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nudcd3Q8R1N4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nudcd3Q8R1N4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nudcd3Q8R1N4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Dio3-201ENSMUST00000097228 1449 ntBASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nudcd3Q8R1N4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms