Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpp40Q8R1F9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpp40Q8R1F9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rpp40Q8R1F9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Gm29707-201ENSMUST00000196325 491 ntBASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpp40Q8R1F9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rpp40Q8R1F9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Rpp40Q8R1F9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Gm7284-201ENSMUST00000131667 944 ntBASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Gm21362-201ENSMUST00000194272 928 ntBASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Gm7367-201ENSMUST00000057611 492 ntBASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpp40Q8R1F9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rpp40Q8R1F9 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rpp40Q8R1F9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms