Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Gm27389-201ENSMUST00000183622 195 ntBASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sf3a1Q8K4Z5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.45■□□□□ 0.86
Sf3a1Q8K4Z5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Phf7-203ENSMUST00000226565 1971 ntBASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sf3a1Q8K4Z5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sf3a1Q8K4Z5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sf3a1Q8K4Z5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sf3a1Q8K4Z5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms