Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col23a1Q8K4G2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col23a1Q8K4G2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.29■□□□□ 0.84
Col23a1Q8K4G2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.29■□□□□ 0.84
Col23a1Q8K4G2 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.29■□□□□ 0.84
Col23a1Q8K4G2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col23a1Q8K4G2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.29■□□□□ 0.84
Col23a1Q8K4G2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col23a1Q8K4G2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Mir6956-201ENSMUST00000183598 62 ntBASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 AC139382.1-201ENSMUST00000221402 498 ntBASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col23a1Q8K4G2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Gm11025-201ENSMUST00000140773 466 ntBASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.27■□□□□ 0.84
Col23a1Q8K4G2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Col23a1Q8K4G2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Gm8396-201ENSMUST00000057361 823 ntBASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col23a1Q8K4G2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col23a1Q8K4G2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col23a1Q8K4G2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col23a1Q8K4G2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms