Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.81■□□□□ 0.6
Depdc1aQ8CIG0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Gm10052-201ENSMUST00000168019 960 ntBASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Gm7729-201ENSMUST00000050143 801 ntBASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Depdc1aQ8CIG0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Gm44430-201ENSMUST00000203376 995 ntBASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Depdc1aQ8CIG0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.78■□□□□ 0.6
Depdc1aQ8CIG0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Gm12895-201ENSMUST00000122214 226 ntBASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Depdc1aQ8CIG0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Depdc1aQ8CIG0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.77■□□□□ 0.59
Depdc1aQ8CIG0 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.77■□□□□ 0.59
Depdc1aQ8CIG0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Depdc1aQ8CIG0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms